<div dir="ltr">Hi Philippe,<div><br><div>I'm sorry for the slow calculation...the problem is the number of boxes is too high. If you download a nightly build like this one:</div><div><br></div><div><a href="https://phenix-online.org/download/phenix/nightly/?version=1.21rc1-5130">https://phenix-online.org/download/phenix/nightly/?version=1.21rc1-5130</a><br></div><div><br></div><div>then it should be a lot faster (still not quick, but in your case should be 20x faster).</div><div>All the best,</div><div>Tom T</div><div><br></div></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Fri, Oct 27, 2023 at 2:16 AM CUNIASSE Philippe <<a href="mailto:Philippe.CUNIASSE@cea.fr">Philippe.CUNIASSE@cea.fr</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div class="msg4308357172349672210">
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<p>Dear all,</p>
<p><br>
</p>
<p>i try to calculate local resolution maps with phenix <span style="font-family:Calibri,Helvetica,sans-serif,Helvetica,EmojiFont,"Apple Color Emoji","Segoe UI Emoji",NotoColorEmoji,"Segoe UI Symbol","Android Emoji",EmojiSymbols;font-size:16px">since
a couple of days</span>. It turns out that the calculation seems very slow and i suspect that there is a problem because i even cannot stop the calculation with the abort button in the gui. In my last run (still running), i use 2 half-maps and the program
can read them correctly, start the calculation by returning that <span style="font-size:12pt">42875 </span><span style="font-size:12pt">boxes are considered. I run it on my MacBook pro (M1 running OSX 13.4 with 32Gb RAM) on 4 cpu. The calculation actually
runs on 4 CPUs. However, with this calculation (and also a smaller map with about 17000 boxes on 1CPU), the calculations run more than 24 hours without finishing. I wonder if there coud be a problem and if no, what could be the duration of such calculation. </span></p>
<p><span style="font-size:12pt">Thanks in advance for your help.</span></p>
<p><span style="font-size:12pt">Best regards.</span></p>
<p><span style="font-size:12pt">Philippe Cuniasse.</span></p>
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<span style="font-size:14pt"> </span></p>
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<span lang="EN-US" style="font-family:Courier">Philippe Cuniasse, PhD/HDR.<u></u><u></u></span></p>
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<span lang="EN-US" style="font-family:Courier;color:rgb(51,51,51)">Institute for Integrative Biology of the Cell (I2BC)</span><span lang="EN-US" style="font-family:Courier"><u></u><u></u></span></p>
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<span style="font-family:Courier">UMR 9198 CNRS-CEA-Univ Paris Sud<u></u><u></u></span></p>
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<span style="font-family:Courier">Bat 144 CE-Saclay<u></u><u></u></span></p>
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<span style="font-family:Courier">91191 Gif-sur-Yvette Cedex, France<u></u><u></u></span></p>
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<span lang="EN-US" style="font-family:Courier">Tel: (33) 1 69 08 56 35<u></u><u></u></span></p>
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<span lang="EN-US" style="font-family:Courier">Fax: (33) 1 69 08 47 12<u></u><u></u></span></p>
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<span lang="EN-US" style="font-family:Courier">Email: </span><span style="font-family:Courier;color:rgb(0,0,254)"><a href="mailto:philippe.cuniasse@cea.fr" target="_blank"><span lang="EN-US" style="color:purple">philippe.cuniasse@cea.fr</span></a></span><span lang="EN-US" style="font-family:Courier"><u></u><u></u></span></p>
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<span lang="EN-US" style="font-family:Courier">Web:</span><span lang="EN-US" style="font-family:Courier;color:rgb(0,0,245)"> </span><span style="font-family:Courier;color:rgb(0,0,245)"><a href="http://biodev.cea.fr/rasmot3d/" target="_blank"><span lang="EN-US" style="color:purple">http://biodev.cea.fr/rasmot3d/</span></a></span><span lang="EN-US" style="font-family:Courier;color:rgb(0,0,245)"><u></u><u></u></span></p>
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<span lang="EN-US" style="font-family:Courier;color:rgb(0,0,245)">Web: <a href="https://www.i2bc.paris-saclay.fr" target="_blank">
<span style="color:rgb(5,99,193)">https://www.i2bc.paris-saclay.fr</span></a><u></u><u></u></span></p>
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<span lang="EN-US" style="font-size:10.5pt;font-family:Courier"><img border="0" width="341" height="78" alt="signature_2661676233"><u></u><u></u></span></p>
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