P
ython-based
H
ierarchical
EN
vironment for
I
ntegrated
X
tallography
Phenix Examples and Tutorials
Phenix examples
Tutorial 1: Solving a structure using SAD data
Tutorial 2: Solving a structure using MAD data
Tutorial 3: Solving a structure using MIR data
Tutorial 4: Iterative model-building, density modification and refinement starting from experimental phases
Tutorial 5: Introduction to molecular replacement, refinement, and rebuilding for novice users
Tutorial 6: Solving a structure using Molecular Replacement
Tutorial 7: Automatically rebuilding a structure solved by Molecular Replacement
Tutorial 8: Fitting a flexible ligand into a difference electron density map
Tutorial 9: Structure refinement
Tutorial 10: Refining a structure in the presence of merohedral twinning
Tutorial 11: Generating ligand coordinates and restraints for structure refinement
Tutorial 12: Structure validation using MolProbity
Running refinement examples on the command line