Phenix Examples and Tutorials

• Phenix examples
• Tutorial 1: Solving a structure using SAD data
• Tutorial 2: Solving a structure using MAD data
• Tutorial 3: Solving a structure using MIR data
• Tutorial 4: Iterative model-building, density modification and refinement starting from experimental phases
• Tutorial 5: Introduction to molecular replacement, refinement, and rebuilding for novice users
• Tutorial 6: Solving a structure using Molecular Replacement
• Tutorial 7: Automatically rebuilding a structure solved by Molecular Replacement
• Tutorial 8: Fitting a flexible ligand into a difference electron density map
• Tutorial 9: Structure refinement
• Tutorial 10: Refining a structure in the presence of merohedral twinning
• Tutorial 11: Generating ligand coordinates and restraints for structure refinement
• Tutorial 12: Structure validation using MolProbity
• Tutorial 13: Running refinement examples on the command line
• Tutorial 14: Solving a cryo-EM structure by density modification, docking, refinement and loop fitting
• Tutorial 15: Solving a cryo-EM structure by density modification, model-building, refinement and loop fitting