[phenixbb] Queueing system commands for parallel Phenix/Rosetta jobs
Terwilliger, Thomas Charles
terwilliger at lanl.gov
Wed Oct 21 06:10:25 PDT 2015
Normally you don't need to specify any queueing system commands, so you should be good to go.
Let me know of any problems!
All the best,
From: phenixbb-bounces at phenix-online.org [phenixbb-bounces at phenix-online.org] on behalf of Yonglin Hu [yonglinhu at gmail.com]
Sent: Tuesday, October 20, 2015 8:46 PM
To: phenixbb at phenix-online.org
Subject: [phenixbb] Queueing system commands for parallel Phenix/Rosetta jobs
We have setup a cluster with several executing nodes and we would like to run our Phenix/Rosetta molecular replacement jobs on the cluster. In the Job Control screen, I put "qsub -q all.q -o $HOME/log1 -e $HOME/log1" as command to use to run multiple jobs. But I am not sure what I should use for "queueing system commands".
We are using SGE as the queueing system on our cluster.
Any help would be greatly appreciated!
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