Hi,
The GUI version is available under "Model tools" and called "Geometry
minimization".
Best regards,
Oleg Sobolev.
On Mon, Apr 27, 2015 at 12:57 PM, Kgosisejo, Oarabile
Hi,
Is there only the command line version of this or the GUI usage is available as well?
Best Regards,
Oarabile Kgosisejo ________________________________________ From: [email protected] [ [email protected]] on behalf of Pavel Afonine [ [email protected]] Sent: January 20, 2015 1:58 PM To: PC; PHENIX list Subject: Re: [phenixbb] idealizing structure
Is there a way to "idealize" a structure in Phenix?
I mean, ideal omega, all residues within allowed regions of Ramachandran maps, no clashes..etc. I know it won't fit the map well but I would like to see what it looks like.
Yes, using phenix.geometry_minimization :
http://phenix-online.org/documentation/reference/geometry_minimization.html
Pavel
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