Re: [phenixbb] idealizing structure

Is there a way to "idealize" a structure in Phenix?

I mean, ideal omega, all residues within allowed regions of Ramachandran maps, no clashes..etc. I know it won't fit the map well but I would like to see what it looks like.

Yes, using phenix.geometry_minimization : http://phenix-online.org/documentation/reference/geometry_minimization.html Pavel