Hi again Ben, I forgot to mention that there are also several worked-out examples for phenix.mr_rosetta: 1. If you go to: $PHENIX/phenix_examples/HNP3-mr-rosetta there is a demo example for a small structure. 2. If you go to: http://www.phenix-online.org/phenix_data/terwilliger/rosetta_2011/ you will find several real examples with scripts in the blind_tests/ directory. All the best, Tom T On Jan 31, 2011, at 1:15 PM, Ben Eisenbraun wrote:
Hi,
I'm testing Rosetta 3.2+PHENIX 1.7-650, and in the phenix.mr_rosetta output, I see:
Checking rosetta paths: rosetta binary: /programs/l/rosetta/3.2/rosetta_source/bin/mr_protocols.default database_dir: /programs/l/rosetta/3.2/rosetta_database script_dir: /programs/l/rosetta/3.2/rosetta_source/src/apps/public/electron_density pilot_script_dir: /programs/l/rosetta/3.2/rosetta_source/src/apps/pilot/frank/
In the script directory, the C++ files were not built along with the regular Rosetta build. Do those need to be compiled for the target platform?
Also, the pilot_script_dir is empty. Is there supposed to be something in there?
Thanks.
-ben
-- | Ben Eisenbraun | SBGrid Consortium | http://sbgrid.org | | Harvard Medical School | http://hms.harvard.edu | _______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb
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