Dear Oli,
The d99 criterion is available in the phenix.mtriage program.
Best wishes,
--
Ricardo Diogo Righetto
2018-05-26 20:44 GMT+02:00 Oliver Clarke
Hi,
I think the “d99” criterion described in this preprint ( https://www.biorxiv.org/content/early/2018/03/14/279844) looks like a really interesting FSC-independent way to measure res in real space, and I’d like to give it a go on my maps (particularly those where I am suspicious of the FSC-based res based on map appearance, or where I suspect overfitting).
Is it available in any phenix package at present? The scripts site mentioned in the preprint (http://phenix-online.org/ phenix_data/afonine/cryoem_validation/) is currently rather sparsely populated.
(Also, I wonder whether a directional version of the d99 criterion might be useful to estimate anisotropic res in the case of a preferred orientation, analogous to the 3D-FSC approach of Yong-Zi Tan and Dmitry Lyumkis?)
Cheers Oli _______________________________________________ phenixbb mailing list [email protected] http://phenix-online.org/mailman/listinfo/phenixbb Unsubscribe: [email protected]