Conflicting scattering type symbols: refine with TaBr
Hi All I'm getting an error refining with TaBr. Got tbr_exp.pdb from Hic-Up and prepared the cif with phenix.elbow. Try to do a refine with the pdb and cif and I get this error. Sorry: Conflicting scattering type symbols: initial symbol: "TA" (from pdb element column) new symbol: "T" (with residue name TBR) atom: "HETATM 1917 TA1 TBR B7131 .*. TA " What are people calling their TaBr records and/or how are they generating their cifs? Thanks F --------------------------------------------- Francis Reyes M.Sc. 215 UCB University of Colorado at Boulder gpg --keyserver pgp.mit.edu --recv-keys 67BA8D5D 8AE2 F2F4 90F7 9640 28BC 686F 78FD 6669 67BA 8D5D
On Fri, Apr 23, 2010 at 1:31 PM, Francis E Reyes wrote: I'm getting an error refining with TaBr. Got tbr_exp.pdb from Hic-Up and
prepared the cif with phenix.elbow. Try to do a refine with the pdb and cif and I get this error. Sorry: Conflicting scattering type symbols:
initial symbol: "TA" (from pdb element column)
new symbol: "T" (with residue name TBR)
atom:
"HETATM 1917 TA1 TBR B7131 .*. TA " The idealized coordinates from HIC-UP (tbr_msd.pdb) have the element type
specified (which the experimental coordinates do not). Would adding that
column help? (You'd probably need to re-run elbow once you have the
corrected file, not jump directly to refinement.)
-Nat
participants (2)
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Francis E Reyes
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Nathaniel Echols