Hi Lau, It doesn't sound normal to me to have a missing directory while AutoBuild is running ... I wonder if you are able to look and see what directories are actually present? If you go to Phenix_Ligandfit/AutoBuild_run_5_ and then look in TEMP0 is there an AutoBuild_run_1_ directory? Run 2? ... Also have a look at the overall log file in Phenix_Ligandfit/AutoBuild_run_5_/AutoBuild_run_5_1.log Does the end of that file have any clues? all the best, Tom T ________________________________ From: [email protected] [[email protected]] on behalf of Lau Sze Yi (SIgN) [[email protected]] Sent: Tuesday, April 07, 2015 1:06 AM To: [email protected] Subject: [phenixbb] Autobuild error Hi, I did an Autobuild run. The Status panel indicated that the run is finished. In the Model building panel the status of run# 5 still says running (See attached screenshot). Is this normal? And when I click on run #4 to Open in Coot, I get an error message indicating that the directory could not be found (see attachment). What is wrong and how can I fix this? I am using version phenix-1.9-1692 on Mac. Regards, Sze Yi Research Fellow Singapore Immunology Network (SigN) 8A Biomedical Grove, #03-06 Immunos, Singapore 138648 DID: +65 6407 0640 Fax: +65 6407 0640