refine error when optimize_wxc w/o optimize_wxu turned on
Hi, Dear all, I was using phenix.refine to refine the structure. Once I turned on optimize_wxc w/o optimize_wxu, the job failed with the following message. ----------xray term weight optimization (wxc)---------- Traceback (most recent call last): File "/Application/phenix/phenix-1.3b-rc6/phenix/phenix/command_line/refine.py", line 5, in <module> command_line.run(command_name="phenix.refine", args=sys.argv[1:]) File "/Application/phenix/phenix-1.3b-rc6/phenix/phenix/refinement/command_line.py", line 82, in run call_back_after_monitor_collect=call_back_after_monitor_collect) File "/Application/phenix/phenix-1.3b-rc6/phenix/phenix/refinement/driver.py", line 1143, in run call_back_after_monitor_collect = call_back_after_monitor_collect) File "/Application/phenix/phenix-1.3b-rc6/phenix/phenix/refinement/strategies.py", line 449, in refinement_machine log = log) File "/Application/phenix/phenix-1.3b-rc6/phenix/phenix/refinement/weight_xray_chem.py", line 256, in __init__ self.wxc_optimization() File "/Application/phenix/phenix-1.3b-rc6/phenix/phenix/refinement/weight_xray_chem.py", line 511, in wxc_optimization wxc = self.holder.wxc The phenix I used is the latest version, 1.3b rc6. The platform is intel-linux-2.6 redhat-e4. Python is 2.4.2 Could anyone please tell me what the problem is? Thank you very much! -- Best Regards, Shi Jiahai
Pavel re-worked the optimize_wxc procedure after 1.3b rc6 was released. Could you please try with the latest CCI Apps? http://www.phenix-online.org/download/cci_apps/ It should only take a few seconds to install and is designed to co-exist with other Phenix or CCI Apps installations (see web page). Ralf
Dear Ralf,
Thank you very much for your suggestion. CCI Apps works fine with me.
Best Regards,
Jiahai
On Mon, Mar 10, 2008 at 9:00 PM, Ralf W. Grosse-Kunstleve
Pavel re-worked the optimize_wxc procedure after 1.3b rc6 was released. Could you please try with the latest CCI Apps? http://www.phenix-online.org/download/cci_apps/ It should only take a few seconds to install and is designed to co-exist with other Phenix or CCI Apps installations (see web page). Ralf _______________________________________________ phenixbb mailing list [email protected] http://www.phenix-online.org/mailman/listinfo/phenixbb
-- Best Regards, Shi Jiahai
participants (2)
-
Ralf W. Grosse-Kunstleve
-
shi jiahai