[phenixbb] coot and mtz interpretation

Heather L Condurso condurso at bc.edu
Wed Aug 28 07:51:11 PDT 2013

I'm having an issue that when I launch coot from the phenix refine gui it
loads the pdb and mtz fine, but the FoFc map colors are green and royal
blue.  When I open coot first and then load the pdb and mtz files, the FoFc
map colors are green and red, but the blobs that were green in the phenix
loaded maps are now red and what was royal blue is now green.  Has anyone
else had this issue?  I am running a mac with OS X 10.6.8 and coot 0.6.1
and phenix 1.8.2-1309.  I have an identical mac running all the same
versions and everything loads green and red as expected. Is there a
parameter file somewhere that tells coot how to display the phenix maps
that may provide a clue as to what is going on?

I appreciate any suggestions,
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20130828/f6ae9753/attachment.htm>

More information about the phenixbb mailing list