[phenixbb] model shifts after real space refinement

Ashok Nayak ashokgocrackin at gmail.com
Wed Dec 15 07:44:47 PST 2021


Hi,
Is there a way to say keep_origin=False in phenix real space refinement. I
used it in the command line version of v3958. It didn't take that.

There is a model shift after the refinement which I think is because the
program brings the map to the origin and hence the refined model as well.

Thanks,
Ashok

-- 

Post-Doctoral Fellow

Department of Biochemistry and Molecular Biology,

Sidney Kimmel cancer Center

Thomas Jefferson University

1020 Locust Street, JAH

Philadelphia, PA, 19107

Phone: 804-661-4620
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