[phenixbb] phenix.polder how to select atoms by _struct_asym.id
pafonine at lbl.gov
Wed Feb 10 09:14:07 PST 2021
currently the only way to make atom selections is to use Phenix atom
selection syntax. To learn about atom selection syntax please refer to
the following resources:
On 2/10/21 05:18, Agnieszka Kiliszek wrote:
> Hi everyone,
> I would like to generate polder maps in phenix of selected ligand
> molecules using mmCIF files. For me, the most convenient way of
> selecting atoms of ligand was to use "_struct_asym.id". Therefore I
> tried syntax selection segid but I received error "no atoms selected".
> In pymol similar syntax "segi" works for the same mmCIF file.
> What can be the reason of the error? Is it a way to select atoms of
> ligand using "_struct_asym.id" in phenix.polder?
> Best regards,
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> phenixbb at phenix-online.org
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