[phenixbb] Phenix.refine question

Mark Saper saper at umich.edu
Fri Mar 18 13:11:13 PDT 2022


Laurie,

Really bizarre.  The experts will have more info, I hope.  When you model the Tyr in the posiive density, is the geometry satisfactory (including main-chain)?  If so, then you might try turning off real space refinement and see what happens.  Check the occupancies of the Tyr also.

-Mark
_____________________
Mark A. Saper, Ph.D.
Associate Professor Emeritus of Biological Chemistry
University of Michigan Medical School
saper at umich.edu  |  +1 734 276 6505

         
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