Phenix

	PHENIX 1.3 beta rc6 available ; Phenix user meeting
	Python-based Hierarchical ENvironment for Integrated Xtallography

PHENIX is a new software suite for the automated determination of macromolecular structures using X-ray crystallography and other methods.

Citing PHENIX:
PHENIX: building new software for automated crystallographic structure determination P.D. Adams, R.W. Grosse-Kunstleve, L.-W. Hung, T.R. Ioerger, A.J. McCoy, N.W. Moriarty, R.J. Read, J.C. Sacchettini, N.K. Sauter and T.C. Terwilliger. Acta Cryst. D58, 1948-1954 (2002)


Download the latest release (1.3 beta rc6) [First request download password]
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Using PHENIX (release 1.3 beta rc6):	Full Documentation PDF
- Assessing data quality with phenix.xtriage
- Automated structure solution with AutoSol
- Automated molecular replacement with AutoMR
- Automated model building and rebuilding with AutoBuild
- Automated ligand fitting with LigandFit
- Structure refinement with phenix.refine
- Generation of ligand coordinates and restraints with elbow
- The PHENIX Graphical User Interface

The PHENIX system also includes SOLVE/RESOLVE, Phaser, Textal, the CCI Applications (phenix.xtriage, phenix.refine, elbow and many more), components from Molprobity, and the Computational Crystallography Toolbox in a Python framework.
Funding for PHENIX: Protein Structure Initiative (NIH General Medical Sciences)

Introduction to PHENIX

Computational Crystallography Toolbox

The PHENIX Team

Acknowledgments

Intranet

The PHENIX Industrial Consortium

For-profit groups can obtain access to PHENIX through a Consortium agreement. This provides a license to use PHENIX and research funds to develop new features in PHENIX tailored to the needs of commercial users.

Information

Members

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Groups developing PHENIX:
Paul Adams	Randy Read	Jane & Dave Richardson	Tom Terwilliger	Tom Ioerger & Jim Sacchettini


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