[phenixbb] generating half maps for combined map using phenix.combine_focused_maps

[Tom Terwilliger]

Hi Manoj,

If you would like to get half-maps produced for combine_focused_maps, then
yes, you want to supply half-maps for each focused map.

The way it works is that the "full" maps (one for the reference map and one
for each focused map) are used to determine the weighting on each map or
region with each map.

Then these weights are applied to the full maps to create the composite
map.  The same weights are then applied to the corresponding half maps to
create a pair of composite half-maps.

Let me know if that does not answer the question!
All the best,
Tom T

On Mon, May 15, 2023 at 5:00 AM Manoj saxena <mks131 at gmail.com> wrote:

> Hi all,
>
> I have a question for generating half  half maps for the combined map in
> Phenix, I am combining 6 regions of a complex (using local refined maps)
> and supplying the reference map and a reference model for the complex.
> Additionally, I am supplying the 2 half maps for the whole complex as input
> fines.
> I was wondering if I need to supply 2 half maps for each of the local
> refined regions as input files in addition to the half maps for the
> reference map.
>
> Thank you
>
> regards
> Manoj
>
>

-- 
Thomas C Terwilliger
Laboratory Fellow, Los Alamos National Laboratory
Senior Scientist, New Mexico Consortium
100 Entrada Dr, Los Alamos, NM 87544
Email: tterwilliger at newmexicoconsortium.org
Tel: 505-431-0010
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20230515/71cbe785/attachment.htm>