[phenixbb] Issue phenix.table1 macOS

Pavel Afonine pafonine at lbl.gov
Sat Mar 9 09:28:50 PST 2024


Hi Xavier,

we can debug this now but we need more details. Specifically, we need 
all input files and the description of steps that lead to the problem 
and the description of the problem itself. I'm not sure what you refer 
to as "consistent results". Also, I'm assuming you are using the latest 
version of Phenix.

Thanks!
Pavel

On 3/9/24 09:11, Xavier Brazzolotto wrote:
> I am facing a strange issue with phenix.table1
>
> Previously, I had generated a Table1 with the GUI that was ok.
> Recently, I have updated to Sonoma 14.4 and when I try to rerun phenix.table1 (or use similar model and with same reflections) do not get consistent results, especially in number of reflections, uniques, CC1/2, CC*...
>
> Besides, at the end of a refinement, I do also get an error when the program tries to auto-load the data (model and maps) in Coot…
>
> Any thoughts about this
>
> Xavier
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